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NFkB p50 Transcription Factor Assay Kit (Colorimetric) (ab207217)

NFkB p50 Transcription Factor Assay Kit (Colorimetric) (ab207217)
  • ChIP - Anti-Histone H3 antibody - Nuclear Loading Control and ChIP Grade (ab1791)

Key features and details

  • Assay type: Semi-quantitative
  • Detection method: Colorimetric
  • Platform: Microplate reader
  • Assay time: 3 hr 30 min
  • Sample type: Cell Lysate, Nuclear Extracts
  • Sensitivity: 500 ng/well

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Properties

  • Storage instructions

    Please refer to protocols.
  • Components 1 x 96 tests 5 x 96 tests
    10X Antibody Binding Buffer 1 x 2.2ml 1 x 11ml
    10X Wash Buffer 1 x 22ml 1 x 110ml
    96-well NFkB assay plate 1 unit 5 units
    Anti-rabbit HRP-conjugated IgG (0.25 μg/μL) 1 x 11µl 1 x 55µl
    Binding Buffer 1 x 10ml 1 x 50ml
    Developing Solution 1 x 11ml 1 x 55ml
    Dithiothreitol (DTT) (1 M) 1 x 100µl 1 x 500µl
    Herring sperm DNA (1 μg/μL) 1 x 100µl 1 x 500µl
    Lysis Buffer 1 x 10ml 1 x 50ml
    Mutated oligonucleotide (10 pmol/µL) 1 x 100µl 1 x 500µl
    NFkB p50 antibodies 1 x 11µl 1 x 55µl
    Plate sealer 1 unit 5 units
    Positive control nuclear extract 1 x 40µl 1 x 200µl
    Protease Inhibitor Cocktail 1 x 100µl 1 x 500µl
    Stop Solution 1 x 11ml 1 x 55ml
    Wild-type oligonucleotide (10 pmol/µL) 1 x 100µl 1 x 500µl
  • Research areas

    • Cell Biology
    • Apoptosis
    • Intracellular
    • NFkB
    • p50
    • Immunology
    • Innate Immunity
    • Macrophage / Inflamm.
    • Signal Transduction
    • Signaling Pathway
    • Nuclear Signaling
    • NFkB Pathway
    • Epigenetics and Nuclear Signaling
    • Nuclear Signaling Pathways
    • NFkB pathway
    • Epigenetics and Nuclear Signaling
    • Transcription
    • Transcription Factors
    • Cancer
    • Signal transduction
    • Nuclear signaling
    • NFkB pathway
    • Cancer
    • Cell Death
    • Apoptosis
    • Apoptosis Markers
    • NFkB
    • p50
  • Function

    NF-kappa-B is a pleiotropic transcription factor which is present in almost all cell types and is involved in many biological processed such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. NF-kappa-B is a homo- or heterodimeric complex formed by the Rel-like domain-containing proteins RELA/p65, RELB, NFKB1/p105, NFKB1/p50, REL and NFKB2/p52 and the heterodimeric p65-p50 complex appears to be most abundant one. The dimers bind at kappa-B sites in the DNA of their target genes and the individual dimers have distinct preferences for different kappa-B sites that they can bind with distinguishable affinity and specificity. Different dimer combinations act as transcriptional activators or repressors, respectively. NF-kappa-B is controlled by various mechanisms of post-translational modification and subcellular compartmentalization as well as by interactions with other cofactors or corepressors. NF-kappa-B complexes are held in the cytoplasm in an inactive state complexed with members of the NF-kappa-B inhibitor (I-kappa-B) family. In a conventional activation pathway, I-kappa-B is phosphorylated by I-kappa-B kinases (IKKs) in response to different activators, subsequently degraded thus liberating the active NF-kappa-B complex which translocates to the nucleus. NF-kappa-B heterodimeric p65-p50 and RelB-p50 complexes are transcriptional activators. The NF-kappa-B p50-p50 homodimer is a transcriptional repressor, but can act as a transcriptional activator when associated with BCL3. NFKB1 appears to have dual functions such as cytoplasmic retention of attached NF-kappa-B proteins by p105 and generation of p50 by a cotranslational processing. The proteasome-mediated process ensures the production of both p50 and p105 and preserves their independent function, although processing of NFKB1/p105 also appears to occur post-translationally. p50 binds to the kappa-B consensus sequence 5'-GGRNNYYCC-3', located in the enhancer region of genes involved in immune response and acute phase reactions. In a complex with MAP3K8, NFKB1/p105 represses MAP3K8-induced MAPK signaling; active MAP3K8 is released by proteasome-dependent degradation of NFKB1/p105.
  • Sequence similarities

    Contains 7 ANK repeats.
    Contains 1 death domain.
    Contains 1 RHD (Rel-like) domain.
  • Domain

    The C-terminus of p105 might be involved in cytoplasmic retention, inhibition of DNA-binding, and transcription activation.
    Glycine-rich region (GRR) appears to be a critical element in the generation of p50.
  • Post-translational
    modifications

    While translation occurs, the particular unfolded structure after the GRR repeat promotes the generation of p50 making it an acceptable substrate for the proteasome. This process is known as cotranslational processing. The processed form is active and the unprocessed form acts as an inhibitor (I kappa B-like), being able to form cytosolic complexes with NF-kappa B, trapping it in the cytoplasm. Complete folding of the region downstream of the GRR repeat precludes processing.
    Phosphorylation at 'Ser-903' and 'Ser-907' primes p105 for proteolytic processing in response to TNF-alpha stimulation. Phosphorylation at 'Ser-927' and 'Ser-932' are required for BTRC/BTRCP-mediated proteolysis.
    Polyubiquitination seems to allow p105 processing.
    S-nitrosylation of Cys-61 affects DNA binding.
  • Cellular localization

    Nucleus. Cytoplasm. Nuclear, but also found in the cytoplasm in an inactive form complexed to an inhibitor.
  • Target information above from: UniProt accession P19838 The UniProt Consortium
    The Universal Protein Resource (UniProt) in 2010
    Nucleic Acids Res. 38:D142-D148 (2010) .

    Information by UniProt
  • Alternative names

    • DKFZp686C01211
    • DNA binding factor KBF1
    • DNA binding factor KBF1 EBP1
    • DNA-binding factor KBF1
    • EBP 1
    • EBP-1
    • EBP1
    • KBF1
    • MGC54151
    • nf b
    • NF kappa B
    • NF kappaB
    • NF kappabeta
    • NF kB1
    • NF-kappaB
    • NFkappaB
    • NFKB 1
    • NFKB p105
    • NFKB p50
    • NFKB-p105
    • Nfkb1
    • NFKB1_HUMAN
    • Nuclear factor kappa B DNA binding subunit
    • Nuclear factor kappa-B
    • Nuclear factor kappa-B, subunit 1
    • Nuclear factor NF kappa B p105 subunit
    • Nuclear factor NF kappa B p50 subunit
    • Nuclear factor NF-kappa-B p50 subunit
    • Nuclear factor of kappa light chain gene enhancer in B cells 1
    • Nuclear factor of kappa light polypeptide gene enhancer in B cells 1
    • Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
    • p105
    • p50
    • p84/NF-kappa-B1 p98
    • Transcription factor NFKB1
    see all
  • Database links

    • Entrez Gene: 4790 Human
    • Entrez Gene: 18033 Mouse
    • Omim: 164011 Human
    • SwissProt: P19838 Human
    • SwissProt: P25799 Mouse
    • Unigene: 618430 Human
    • Unigene: 256765 Mouse

    Images

    • Nuclear extracts were assayed for NFkB p50 activity using ab207217.
      Nuclear extracts were assayed for NFkB p50 activity using ab207217.

      Nuclear extracts prepared from untreated HeLa cells (Light gray), HeLa cells treated with TNF-α (Dark gray), untreated Jurkat cells (White), Jurkat cells treated with PMA and calcium ionophore (CI) (Black) and Raji cells (Black dots on white) were assayed at 10 µg/well for NFkB p50 activity using ab207217. Data shown are the results from wells assayed in duplicate. These results are provided for demonstration only.

    Please note: All products are "FOR RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES"
    For licensing inquiries, please contact partnerships@abcam.com

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