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Epigenetics and Nuclear Signaling Chromatin Binding Proteins Methylated DNA

Anti-Pdd1 antibody (ab5338)

Price and availability

268 032 ₸

Availability

Order now and get it on Thursday February 25, 2021

Anti-Pdd1 antibody (ab5338)
  • ChIP - Anti-Histone H3 antibody - Nuclear Loading Control and ChIP Grade (ab1791)
  • ChIP - Anti-Histone H3 antibody - Nuclear Loading Control and ChIP Grade (ab1791)

Key features and details

  • Rabbit polyclonal to Pdd1
  • Suitable for: WB, ICC
  • Reacts with: Tetrahymena
  • Isotype: IgG

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Overview

  • Product name

    Anti-Pdd1 antibody
  • Description

    Rabbit polyclonal to Pdd1
  • Host species

    Rabbit
  • Tested Applications & Species

    Application Species
    WB
    Tetrahymena
    See all applications and species data
  • Immunogen

    Synthetic peptide corresponding to Tetrahymena Pdd1 aa 300-400 conjugated to keyhole limpet haemocyanin.
    (Peptide available as ab24392)

Properties

  • Form

    Liquid
  • Storage instructions

    Shipped at 4°C. Store at +4°C short term (1-2 weeks). Upon delivery aliquot. Store at -20°C or -80°C. Avoid freeze / thaw cycle.
  • Storage buffer

    pH: 7.40
    Preservative: 0.02% Sodium azide
    Constituent: PBS

    Batches of this product that have a concentration
  • Concentration information loading...
  • Purity

    Immunogen affinity purified
  • Clonality

    Polyclonal
  • Isotype

    IgG
  • Research areas

    • Epigenetics and Nuclear Signaling
    • Chromatin Binding Proteins
    • Methylated DNA
    • Epigenetics and Nuclear Signaling
    • Transcription
    • Transcription Factors

Associated products

  • Compatible Secondaries

    • Goat Anti-Rabbit IgG H&L (Alexa Fluor® 488) (ab150077)
    • Goat Anti-Rabbit IgG H&L (HRP) (ab205718)
  • Isotype control

    • Rabbit IgG, polyclonal - Isotype Control (ChIP Grade) (ab171870)

Applications

The Abpromise guarantee

Our Abpromise guarantee covers the use of ab5338 in the following tested applications.

The application notes include recommended starting dilutions; optimal dilutions/concentrations should be determined by the end user.

Guaranteed

Tested applications are guaranteed to work and covered by our Abpromise guarantee.

Predicted

Predicted to work for this combination of applications and species but not guaranteed.

Incompatible

Does not work for this combination of applications and species.

Application Species
WB
Tetrahymena
Application Abreviews Notes
WB (1)
1/1000. Detects a band of approximately 64 kDa (predicted molecular weight: 57 kDa).
ICC
Use at an assay dependent concentration.
Notes
WB
1/1000. Detects a band of approximately 64 kDa (predicted molecular weight: 57 kDa).
ICC
Use at an assay dependent concentration.

Target

  • Relevance

    The PDD1 gene sequence predicts a novel polypeptide containing two copies of a chromodomain, a conserved domain found in a number of heterochromatin-associated proteins (Koonin et al. 1995). Consistent with this finding, Pdd1p localizes to electron-dense heterochromatic structures that concentrate at the periphery of macronuclear anlagen during the time when DNA deletion occurs.
  • Cellular localization

    Nuclear
  • Database links

    • SwissProt: Q94996 Tetrahymena
    • Alternative names

      • p65 antibody
      • Pdd 1 antibody
      • Pdd 1p antibody
      • Pdd1p antibody
      • Programmed DNA degradation (pdd) antibody
      see all

    Images

    • Immunocytochemistry - Anti-Pdd1 antibody (ab5338)
      Immunocytochemistry - Anti-Pdd1 antibody (ab5338)This image is courtesy of an Anonymous Abreview.
      ab5338 staining Pdd1 in wild-type Tetrahymena sp. cells by Immunocytochemistry/ Immunofluorescence. Cells were fixed in methanol. The primary antibody was diluted 1/250 in TBS + 1% Goat Serum and incubated with the sample for 18 hours at 4°C. The secondary antibody was Alexa Fluor® 488-conjugated Goat anti-Rabbit polyclonal, diluted 1/1000.

      See Abreview

    • Western blot - Anti-Pdd1 antibody (ab5338)
      Western blot - Anti-Pdd1 antibody (ab5338)This image is courtesy of an anonymous Abreview.
      All lanes : Anti-Pdd1 antibody (ab5338) at 1/1000 dilution

      Lane 1 : Wild-type Tetrahymena sp. Starved Tetrahymena, do not express pdd1p (hour 0)
      Lane 2 : Wild-type Tetrahymena sp. Conjugating Tetrahymena, peak of pdd1p expression (hour 9)

      Lysates/proteins at 15000 cells per lane.

      Secondary
      All lanes : HRP-conjugated Goat anti-Rabbit at 1/5000 dilution

      Developed using the ECL technique.

      Performed under reducing conditions.

      Predicted band size: 57 kDa
      Observed band size: 64 kDa
      why is the actual band size different from the predicted?


      Exposure time: 30 seconds

      See Abreview

    Protocols

    • Western blot protocols

    Click here to view the general protocols

    Datasheets and documents

    • Datasheet
  • References (17)

    Publishing research using ab5338? Please let us know so that we can cite the reference in this datasheet.

    ab5338 has been referenced in 17 publications.

    • Garg J  et al. The Med31 Conserved Component of the Divergent Mediator Complex in Tetrahymena thermophila Participates in Developmental Regulation. Curr Biol 29:2371-2379.e6 (2019). PubMed: 31280994
    • Noto T & Mochizuki K Small RNA-Mediated trans-Nuclear and trans-Element Communications in Tetrahymena DNA Elimination. Curr Biol 28:1938-1949.e5 (2018). PubMed: 29887308
    • Kataoka K & Mochizuki K Heterochromatin aggregation during DNA elimination in Tetrahymena is facilitated by a prion-like protein. J Cell Sci 130:480-489 (2017). ICC/IF ; Tetrahymena . PubMed: 27909245
    • Farley BM & Collins K Transgenerational function of Tetrahymena Piwi protein Twi8p at distinctive noncoding RNA loci. RNA 23:530-545 (2017). PubMed: 28053272
    • Suhren JH  et al. Negative Regulators of an RNAi-Heterochromatin Positive Feedback Loop Safeguard Somatic Genome Integrity in Tetrahymena. Cell Rep 18:2494-2507 (2017). PubMed: 28273462
    View all Publications for this product

    Images

    • Immunocytochemistry - Anti-Pdd1 antibody (ab5338)
      Immunocytochemistry - Anti-Pdd1 antibody (ab5338) This image is courtesy of an Anonymous Abreview.
      ab5338 staining Pdd1 in wild-type Tetrahymena sp. cells by Immunocytochemistry/ Immunofluorescence. Cells were fixed in methanol. The primary antibody was diluted 1/250 in TBS + 1% Goat Serum and incubated with the sample for 18 hours at 4°C. The secondary antibody was Alexa Fluor® 488-conjugated Goat anti-Rabbit polyclonal, diluted 1/1000.

      See Abreview

    • Western blot - Anti-Pdd1 antibody (ab5338)
      Western blot - Anti-Pdd1 antibody (ab5338) This image is courtesy of an anonymous Abreview.
      All lanes : Anti-Pdd1 antibody (ab5338) at 1/1000 dilution

      Lane 1 : Wild-type Tetrahymena sp. Starved Tetrahymena, do not express pdd1p (hour 0)
      Lane 2 : Wild-type Tetrahymena sp. Conjugating Tetrahymena, peak of pdd1p expression (hour 9)

      Lysates/proteins at 15000 cells per lane.

      Secondary
      All lanes : HRP-conjugated Goat anti-Rabbit at 1/5000 dilution

      Developed using the ECL technique.

      Performed under reducing conditions.

      Predicted band size: 57 kDa
      Observed band size: 64 kDa
      why is the actual band size different from the predicted?


      Exposure time: 30 seconds

      See Abreview

    Please note: All products are "FOR RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES"
    For licensing inquiries, please contact partnerships@abcam.com

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