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Epigenetics and Nuclear Signaling Transcription Domain Families Zinc Finger

Human TRIM56 knockout A549 cell lysate (ab258250)

Human TRIM56 knockout A549 cell lysate (ab258250)
  • ChIP - Anti-Histone H3 antibody - Nuclear Loading Control and ChIP Grade (ab1791)
  • ChIP - Anti-Histone H3 antibody - Nuclear Loading Control and ChIP Grade (ab1791)
  • ChIP - Anti-Histone H3 antibody - Nuclear Loading Control and ChIP Grade (ab1791)
  • ChIP - Anti-Histone H3 antibody - Nuclear Loading Control and ChIP Grade (ab1791)
  • ChIP - Anti-Histone H3 antibody - Nuclear Loading Control and ChIP Grade (ab1791)

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Overview

  • Product name

    Human TRIM56 knockout A549 cell lysate
    See all TRIM56 kits
  • Product overview


    Knockout cell lysate achieved by CRISPR/Cas9.

  • Parental Cell Line

    A549
  • Organism

    Human
  • Mutation description

    Knockout achieved by using CRISPR/Cas9, 13 bp deletion in exon3 and 1 bp deletion in exon3 and 31 bp deletion in exon3.
  • Passage number

  • Knockout validation

    Sanger Sequencing, Western Blot (WB)
  • Reconstitution notes

    To use as WB control, resuspend the lyophilizate in 50 µL of LDS* Sample Buffer to have a final concentration of 2 mg/ml. For reducing conditions, we recommend a final concentration of 0.1 M DTT.

    *Usage of SDS sample buffer is not recommended with these lyophilized lysates.

  • Notes

    Lysate preparation: Our lysates are made using RIPA buffer to which we add a protease inhibitor cocktail and phosphatase inhibitor cocktail (ratio: 300:100:10). This means that the protein of interest is denatured. If you require a native form of the protein please use the live cell version - found here. Please refer to our lysis protocol for further details on how our lysates are prepared.

    User storage instructions: Lyophilizate may be stored at 4°C. After reconstitution, store at -20°C for short-term storage or -80°C for long-term storage.

    Access thousands of knockout cell lysates, generated from commonly used cancer cell lines.
    See here for more information on knockout cell lysates.

    Abcam has not and does not intend to apply for the REACH Authorisation of customers’ uses of products that contain European Authorisation list (Annex XIV) substances.
    It is the responsibility of our customers to check the necessity of application of REACH Authorisation, and any other relevant authorisations, for their intended uses.

    This product is subject to limited use licenses from The Broad Institute and ERS Genomics Limited, and is developed with patented technology. For full details of the limited use licenses and relevant patents please refer to our limited use license and patent pages.

  • Tested applications

    Suitable for: WBmore details

Properties

  • Storage instructions

    Store at -80°C. Please refer to protocols.
  • Components 1 kit
    ab263626 - Human TRIM56 knockout A549 cell lysate 1 x 100µg
    ab255554 - Human wild-type A549 cell lysate 1 x 100µg
  • Research areas

    • Epigenetics and Nuclear Signaling
    • Transcription
    • Domain Families
    • Zinc Finger
    • Epigenetics and Nuclear Signaling
    • Transcription
    • Domain Families
    • Developmental Families
    • Other
  • Cell type

    epithelial
  • Disease

    Carcinoma
  • STR Analysis

    Amelogenin X,Y D5S818: 11 D13S317: 11 D7S820: 8, 11 D16S539: 11, 12 vWA: 14 TH01: 8,9.3 TPOX: 8,11 CSF1PO: 10, 12

Target

  • Function

    E3 ubiquitin-protein ligase that mediates 'Lys-63'-linked polyubiquitination of TMEM173/STING, thereby playing a key role in innate immunity. TMEM173/STING 'Lys-63'-linked ubiquitination activates the production of type I interferon IFN-beta following detection of pathogen- and host-derived double-stranded DNA.
  • Sequence similarities

    Belongs to the TRIM/RBCC family.
    Contains 2 B box-type zinc fingers.
    Contains 1 RING-type zinc finger.
  • Cellular localization

    Cytoplasm.
  • Target information above from: UniProt accession Q9BRZ2 The UniProt Consortium
    The Universal Protein Resource (UniProt) in 2010
    Nucleic Acids Res. 38:D142-D148 (2010) .

    Information by UniProt
  • Alternative names

    • A130009K11Rik
    • DKFZp667O116
    • E3 ubiquitin-protein ligase TRIM56
    • FLJ35608
    • Gm452
    • MGC37358
    • OTTMUSP00000027392
    • RING finger protein 109
    • RNF109
    • TRI56_HUMAN
    • Trim56
    • Tripartite motif containing protein 56
    • Tripartite motif-containing protein 56
    see all

Properties

  • Storage instructions

    Store at -80°C. Please refer to protocols.
  • Components 1 kit
    ab263626 - Human TRIM56 knockout A549 cell lysate 1 x 100µg
    ab255554 - Human wild-type A549 cell lysate 1 x 100µg
  • Research areas

    • Epigenetics and Nuclear Signaling
    • Transcription
    • Domain Families
    • Zinc Finger
    • Epigenetics and Nuclear Signaling
    • Transcription
    • Domain Families
    • Developmental Families
    • Other
  • Cell type

    epithelial
  • Disease

    Carcinoma
  • STR Analysis

    Amelogenin X,Y D5S818: 11 D13S317: 11 D7S820: 8, 11 D16S539: 11, 12 vWA: 14 TH01: 8,9.3 TPOX: 8,11 CSF1PO: 10, 12

Images

  • Western blot - Human TRIM56 knockout A549 cell lysate (ab258250)
    Western blot - Human TRIM56 knockout A549 cell lysate (ab258250)

    Lane 1:Wild-type A549 (Human lung carcinoma cell line) whole cell lysate (20 ug)
    Lane 2:TRIM56 knockout A549 (Human lung carcinoma cell line) whole cell lysate (20 ug)
    Lane 3:MCF7 (Human breast adenocarcinoma cell line) whole cell lysate (20 ug)
    Lane 4:A-375 (Human malignant melanoma cell line) whole cell lysate (20 ug)

    ab154821 was shown to specifically react with TRIM56 in wild-type A549 cells. Loss of signal was observed when knockout cell line ab267063 (knockout cell lysate ab258250) was used. Wild-type and TRIM56 knockout samples were subjected to SDS-PAGE. ab154821 and Anti-GAPDH antibody [6C5] - Loading Control (ab8245) were incubated overnight at 4oC at 1 in 1000 dilution and 1 in 20000 dilution respectively. Blots were developed with Goat anti-Rabbit IgG H&L (IRDye® 800CW) preadsorbed (ab216773) and Goat anti-Mouse IgG H&L (IRDye® 680RD) preadsorbed (ab216776) secondary antibodies at 1 in 20000 dilution for 1 hour at room temperature before imaging.

  • Western blot - Human TRIM56 knockout A549 cell lysate (ab258250)
    Western blot - Human TRIM56 knockout A549 cell lysate (ab258250)

    Lane 1:Wild-type A549 (Human lung carcinoma cell line) whole cell lysate (20 ug)
    Lane 2:TRIM56 knockout A549 (Human lung carcinoma cell line) whole cell lysate (20 ug)
    Lane 3:MCF7 (Human breast adenocarcinoma cell line) whole cell lysate (20 ug)
    Lane 4:A-375 (Human malignant melanoma cell line) whole cell lysate (20 ug)

    ab154862 was shown to specifically react with TRIM56 in wild-type A549 cells. Loss of signal was observed when knockout cell line ab267063 (knockout cell lysate ab258250) was used. Wild-type and TRIM56 knockout samples were subjected to SDS-PAGE. ab154862 and Anti-GAPDH antibody [6C5] - Loading Control (ab8245) were incubated overnight at 4oC at 1 in 1000 dilution and 1 in 20000 dilution respectively. Blots were developed with Goat anti-Rabbit IgG H&L (IRDye® 800CW) preadsorbed (ab216773) and Goat anti-Mouse IgG H&L (IRDye® 680RD) preadsorbed (ab216776) secondary antibodies at 1 in 20000 dilution for 1 hour at room temperature before imaging.

  • Sanger Sequencing - Human TRIM56 knockout A549 cell lysate (ab258250)
    Sanger Sequencing - Human TRIM56 knockout A549 cell lysate (ab258250)

    Allele-1: 31 bp deletion in exon3

     

  • Sanger Sequencing - Human TRIM56 knockout A549 cell lysate (ab258250)
    Sanger Sequencing - Human TRIM56 knockout A549 cell lysate (ab258250)

    Allele-2: 13 bp deletion in exon3

     

  • Sanger Sequencing - Human TRIM56 knockout A549 cell lysate (ab258250)
    Sanger Sequencing - Human TRIM56 knockout A549 cell lysate (ab258250)

    Allele-3: 1 bp deletion in exon3

     

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